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Predictive, preventive, personalized and participatory medicine: back to the future
Charles
Auffray,
Dominique
Charron,
Leroy
Hood
Genome Medicine 2010, 2:57 (26 August 2010)
Abstract
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Editor’s summary
The pioneering work of Jean Dausset on the human leukocyte antigen system provides lessons that should be applied to systems medicine.
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Recent insights into the role of NF-kappaB in ovarian carcinogenesis
Ayesha
B
Alvero
Genome Medicine 2010, 2:56 (25 August 2010)
Abstract
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Editor’s summary
NF-κB plays a role in the initiation and progression of ovarian cancer and represents a potential target for the development of novel therapeutics for this type of cancer.
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Genomic imprinting in diabetes
Braxton
D
Mitchell,
Toni
I
Pollin
Genome Medicine 2010, 2:55 (23 August 2010)
Abstract
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Editor’s summary
Genetic imprinting is known to have a role in 6q24-related transient neonatal diabetes, and recent research has also revealed parent of origin effects in type I and II diabetes mellitus.
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Environmental exposures and mutational patterns of cancer genomes
Gerd
P
Pfeifer
Genome Medicine 2010, 2:54 (16 August 2010)
Abstract
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Editor’s summary
Whole-genome sequences of cancers reveal the different kinds of mutation caused by environmental carcinogens.
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Predictive biomarker discovery through the parallel integration of clinical trial and functional genomics datasets
Charles
Swanton,
James
MG
Larkin,
Marco
Gerlinger,
Aron
C
Eklund,
Michael
Howell,
Gordon
Stamp,
Julian
Downward,
Martin
Gore,
P Andrew
Futreal,
Bernard
Escudier,
Fabrice
Andre,
Laurence
Albiges,
Benoit
Beuselinck,
Stephane
Oudard,
Jens
Hoffmann,
Balazs
Gyorffy,
Chris
Torrance,
Karen
A
Boehme,
Hansjuergen
Volkmer,
Luisella
Toschi,
Barbara
Nicke,
Marlene
Beck,
Zoltan
Szallasi
Genome Medicine 2010, 2:53 (11 August 2010)
Abstract
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Shared pathways to infectious disease susceptibility?
Chiea
C
Khor,
Martin
L
Hibberd
Genome Medicine 2010, 2:52 (10 August 2010)
Abstract
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Editor’s summary
Genomic research so far suggests that host susceptibility to different pathogens is controlled by discrete genes and pathways, but as technology develops it may unravel shared mechanisms across multiple pathogen groups.
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Translational bioinformatics in the cloud: an affordable alternative
Joel
T
Dudley,
Yannick
Pouliot,
Rong
Chen,
Alexander
A
Morgan,
Atul
J
Butte
Genome Medicine 2010, 2:51 (6 August 2010)
Abstract
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Editor’s summary
Cloud-based analysis offers a valid alternative both in terms of performance and cost to local computational clusters for the integration and analysis of large-scale genomic datasets relevant for translational research.
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Prenatal diagnosis of fetal aneuploidies: post-genomic developments
Sinuhe
Hahn,
Laird
G
Jackson,
Bernhard
G
Zimmermann
Genome Medicine 2010, 2:50 (5 August 2010)
Abstract
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Editor’s summary
Non-invasive prenatal diagnosis of fetal aneuploidies may soon become possible with new genomic and proteomic technologies.
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Whole proteomes as internal standards in quantitative proteomics
Shao-En
Ong
Genome Medicine 2010, 2:49 (30 July 2010)
Abstract
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Editor’s summary
Pooling several proteomes labeled with stable isotopes yields an internal standard that can greatly increase the accuracy of quantitative proteomics.
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Piecing together the problems in diagnosing low-level chromosomal mosaicism
Caroline
Robberecht,
Jean-Pierre
Fryns,
Joris Robert
Vermeesch
Genome Medicine 2010, 2:47 (29 July 2010)
Abstract
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Editor’s summary
Low-level somatic chromosomal mosaicism can cause disease but is not easy to detect; genomic technologies are improving understanding and opening up new possibilities for diagnosis.
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Prostate cancer genomics: can we distinguish between indolent and fatal disease using genetic markers?
Fredrik
Wiklund
Genome Medicine 2010, 2:45 (29 July 2010)
Abstract
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Editor’s summary
While genome-wide association studies have revealed genetic variants associated with prostate cancer, there is a need for further research into genetic factors able to discriminate between indolent and fatal forms of the disease in order to improve clinical management.
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Functional genomics and rheumatoid arthritis: where have we been and where should we go?
James
N
Jarvis,
Mark Barton
Frank
Genome Medicine 2010, 2:44 (28 July 2010)
Abstract
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Editor’s summary
Gene expression profiling studies have enabled the development of signatures for patient classification and prediction of response to therapy in rheumatoid arthritis, and ongoing research into the transcriptome will likely bring further insight into our understanding of the disease.
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Models of the human metabolic network: aiming to reconcile metabolomics and genomics
Philip
W
Kuchel
Genome Medicine 2010, 2:46 (28 July 2010)
Abstract
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Editor’s summary
The mainstream view of metabolism is being challenged, and creating a computer model of the metabolic network requires the development of new metabolite analysis techniques before it can become a reality.
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Novel proteins associated with risk for coronary heart disease or stroke among postmenopausal women identified by in-depth plasma proteome profiling
Ross
L
Prentice,
Sophie
Paczesny,
Aaron
Aragaki,
Lynn
M
Amon,
Lin
Chen,
Sharon
J
Pitteri,
Martin
McIntosh,
Pei
Wang,
Tina
Buson Busald,
Judith
Hsia,
Rebecca
D
Jackson,
Jacques
E
Rossouw,
JoAnn
E
Manson,
Karen
Johnson,
Charles
Eaton,
Samir
M
Hanash
Genome Medicine 2010, 2:48 (28 July 2010)
Abstract
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Editor’s summary
In-depth proteome analysis of samples from postmenopausal women identifies the level of beta-2 microglobulin and insulin-like growth factor binding protein as biomarkers for risk of coronary heart disease and stroke respectively.
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The influence of genomics and proteomics on the development of potential vaccines against meningococcal infection
John
E
Heckels,
Jeannette
N
Williams
Genome Medicine 2010, 2:43 (22 July 2010)
Abstract
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Editor’s summary
Sequencing of genomes and availability of the corresponding protein databases, combined with sensitive proteomic techniques, have opened up exciting new avenues in meningococcal vaccine research.
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Ethical issues raised by common copy number variants and single nucleotide polymorphisms of certain and uncertain significance in general medical practice
Arthur
L
Beaudet
Genome Medicine 2010, 2:42 (17 July 2010)
Abstract
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Editor’s summary
Tests for single nucleotide polymorphisms and copy number variations generate differing ethical issues, but offering either test direct to consumers without guidance and interpretation from a physician or counselor raises further concerns.
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Clinical proteomics of myeloid leukemia
Sigrun
M
Hjelle,
Rakel
B
Forthun,
Ingvild
Haaland,
Håkon
Reikvam,
Gry
Sjøholt,
Øystein
Bruserud,
Bjørn
T
Gjertsen
Genome Medicine 2010, 2:41 (29 June 2010)
Abstract
| Full text | PDF | PubMed
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Editor’s summary
Research into the leukemic cell proteomes should lead to the development of molecular diagnostic tools and the identification of novel biomarkers for the prediction of response to therapy in myeloid leukemias, opening new avenues for personalized medicine.
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Serotonin transporter polymorphisms and panic disorder
Johannes
Schumacher,
Jürgen
Deckert
Genome Medicine 2010, 2:40 (29 June 2010)
Abstract
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Editor’s summary
The identification of polymorphisms of the serotonin transporter gene SLC6A4 as risk variants for panic disorder could pave the way for a better understanding of the pathophysiology of anxiety disorders and the development of prevention strategies.
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So what have data standards ever done for us? The view from metabolomics
Julian
L
Griffin,
Christoph
Steinbeck
Genome Medicine 2010, 2:38 (24 June 2010)
Abstract
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Editor’s summary
Metabolomic data standardization is lagging behind some other research fields, but there would be great benefits if all metabolomic data were submitted to a central repository in a standard format.
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Genomic insights into early-onset obesity
Hélène
Choquet,
David
Meyre
Genome Medicine 2010, 2:36 (23 June 2010)
Abstract
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Editor’s summary
Genomic research is improving our understanding of the genetic factors that play a role in the development of early-onset obesity and may pave the way for personalized preventive strategies and therapy.
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ABO blood group and other genetic variants associated with pancreatic cancer
Anne
Lennon,
Alison
P
Klein,
Michael
Goggins
Genome Medicine 2010, 2:39 (22 June 2010)
Abstract
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Editor’s summary
Recent genome-wide association studies of pancreatic cancer have resurrected hypotheses of associations with ABO blood group.
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High-throughput sequencing identifies STAT3 as the DNA-associated factor for p53-NF-κB-complex-dependent gene expression in human heart failure
Mun-Kit
Choy,
Mehregan
Movassagh,
Lee
Siggens,
Ana
Vujic,
Martin
Goddard,
Ana
Sánchez,
Neil
Perkins,
Nichola
Figg,
Martin
Bennett,
Jason
Carroll,
Roger
Foo
Genome Medicine 2010, 2:37 (14 June 2010)
Abstract
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Editor’s summary
A cooperative transcription factor complex involving p53, NF-kappa-B and STAT3 is responsible for the transcriptional regulation of miRNA-21, a microRNA relevant for the pathology of heart failure.
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Novel genes for QTc interval. How much heritability is explained, and how much is left to find?
Yalda
Jamshidi,
Ilja
M
Nolte,
Timothy
D
Spector,
Harold
Snieder
Genome Medicine 2010, 2:35 (27 May 2010)
Abstract
| Full text | PDF | PubMed
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Editor’s summary
QTc interval is a complex trait with prognostic relevance for cardiovascular mortality, and about 10% of the heritability of this trait can be identified in a genetic risk model examining significant single nucleotide polymorphisms.
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Retinitis pigmentosa and allied conditions today: a paradigm of translational research
Carmen
Ayuso,
Jose
M
Millan
Genome Medicine 2010, 2:34 (27 May 2010)
Abstract
| Full text | PDF | PubMed
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Editor’s summary
Knowledge of genes and pathways involved in photoreceptor degeneration underlying retinitis pigmentosa is the first step in implementing correct clinical management, and possible prevention or therapy.
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The role of complex genomic alterations in neuroblastoma risk estimation
Matthias
Fischer,
Frank
Berthold
Genome Medicine 2010, 2:31 (19 May 2010)
Abstract
| Full text | PDF | PubMed
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Editor’s summary
Global genomic profiles could help define the prognosis of neuroblastoma patients.
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